Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT24835AP-5 complex subunit sigma-1. (189 aa)    
Predicted Functional Partners:
KP79_PYT09915
AP-5 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 0.911
KP79_PYT15324
Spatacsin.
    
 
 0.803
KP79_PYT05173
AP-5 complex subunit zeta-1.
    
 0.783
KP79_PYT08157
AP-3 complex subunit delta-1.
     
 0.545
KP79_PYT17531
AP-5 complex subunit sigma-1.
  
  
 
0.542
KP79_PYT10402
Aftiphilin.
     
  0.540
KP79_PYT15516
Uncharacterized protein.
     
  0.540
KP79_PYT05517
Vesicular acetylcholine transporter.
     
  0.540
KP79_PYT09267
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 0.530
KP79_PYT10069
AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 0.530
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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