Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT24754Complement C1q tumor necrosis factor-related protein 5. (146 aa)    
Predicted Functional Partners:
KP79_PYT22823
Complement C1q-like protein 2.
  
     0.483
KP79_PYT16848
Complement C1q-like protein 3.
  
     0.442
KP79_PYT14461
Complement C1q-like protein 3.
  
     0.439
KP79_PYT22521
Complement C1q-like protein 4.
  
     0.435
KP79_PYT03483
Caprin-2.
  
     0.425
KP79_PYT19636
Complement C1q-like protein 2.
  
     0.424
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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