Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT11430THUMP domain-containing protein 3. (564 aa)    
Predicted Functional Partners:
KP79_PYT00567
tRNA methyltransferase 112-like.
    
 
 0.921
KP79_PYT12070
Wiskott-Aldrich syndrome protein.
   
 0.754
KP79_PYT12796
Calcium uptake protein 3, mitochondrial.
    
   0.734
KP79_PYT22346
Integrator complex subunit 10.
      
 0.677
KP79_PYT06651
Intersectin-1.
   
 0.672
KP79_PYT21242
Intersectin-1.
   
 0.672
KP79_PYT12487
Intersectin-2.
   
 0.672
KP79_PYT07804
Uncharacterized protein.
    
 
 0.631
KP79_PYT16346
Eukaryotic translation initiation factor 4E transporter.
    
 
 0.617
KP79_PYT19366
WH2 domain-containing protein.
    
 0.606
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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