Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT14129UPF0489 protein C5orf22-like. (435 aa)    
Predicted Functional Partners:
KP79_PYT08390
tRNA:m(4)X modification enzyme TRM13-like.
   
  
 0.634
KP79_PYT15266
Tubulin polyglutamylase complex subunit 2.
      
 0.569
KP79_PYT11492
Polyglutamine-binding protein 1.
    
   0.562
KP79_PYT13566
Uncharacterized protein.
   
    0.535
KP79_PYT03293
Pre-mRNA-splicing factor CWC25-like.
   
    0.525
KP79_PYT18936
LIX1-like protein.
   
 0.501
KP79_PYT12770
NTF2-related export protein 2.
      
 0.496
KP79_PYT23465
Alpha/beta hydrolase domain-containing protein 13.
      
 0.474
KP79_PYT06921
Protein four-jointed.
   
 
 0.474
KP79_PYT24274
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.461
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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