Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT14144Protocadherin Fat 3. (1361 aa)    
Predicted Functional Partners:
KP79_PYT18936
LIX1-like protein.
   
 0.715
KP79_PYT06921
Protein four-jointed.
   
 
 0.711
KP79_PYT21745
Arginine-glutamic acid dipeptide repeats protein.
    
 0.625
KP79_PYT04200
Uridine kinase; Belongs to the uridine kinase family.
    
 0.616
KP79_PYT24421
Catenin beta.
    
 0.616
KP79_PYT08262
Uridine kinase; Belongs to the uridine kinase family.
    
 0.616
KP79_PYT24983
Mucin-22.
   
 0.545
KP79_PYT23905
Mucin-22.
   
 0.545
KP79_PYT18549
Uncharacterized protein.
   
 0.545
KP79_PYT07673
Armadillo repeat-containing protein 2.
   
 0.545
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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