STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT08551Uncharacterized protein. (586 aa)    
Predicted Functional Partners:
KP79_PYT10589
E3 ubiquitin-protein ligase FANCL.
    
 0.999
KP79_PYT13029
Uncharacterized protein.
    
 0.999
KP79_PYT09538
Fanconi anemia group M protein.
   
 0.999
KP79_PYT12171
Uncharacterized protein.
   
 0.997
KP79_PYT07482
Uncharacterized protein.
    
 0.997
KP79_PYT10936
Fanconi anemia group D2 protein.
    
 0.996
KP79_PYT17773
Fanconi anemia group I protein-like.
    
 0.990
KP79_PYT13516
Fanconi anemia group A protein.
   
 0.982
KP79_PYT07668
Fanconi anemia-associated protein 100.
    
 0.979
KP79_PYT18641
Fanconi anemia group E protein.
    
 0.978
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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