Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT23527Activator of basal transcription 1. (252 aa)    
Predicted Functional Partners:
KP79_PYT10413
Ribosomal RNA processing protein 36-like.
   
 
 0.987
KP79_PYT15579
ATP-dependent RNA helicase DDX49; Belongs to the DEAD box helicase family.
   
 
 0.971
KP79_PYT09364
ESF1-like.
   
 
 0.970
KP79_PYT07218
RNA helicase.
   
 
 0.968
KP79_PYT13990
Neuroguidin.
   
 
 0.960
KP79_PYT18405
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.957
KP79_PYT12879
Periodic tryptophan protein 2-like.
   
 
 0.953
KP79_PYT23670
Bystin.
   
 
 0.949
KP79_PYT09940
Digestive organ expansion factor-like.
   
 
 0.944
KP79_PYT17033
Nucleolar protein 14.
   
 
 0.944
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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