Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT11370Protein UXT-like. (165 aa)    
Predicted Functional Partners:
KP79_PYT06497
P53 and DNA damage-regulated protein 1.
   
 
 0.985
KP79_PYT04041
Prefoldin subunit 6.
    
 
 0.985
KP79_PYT22021
Prefoldin subunit 2.
   
 
 0.982
KP79_PYT10412
WD repeat-containing protein 92.
    
 
 0.980
KP79_PYT13439
Unconventional prefoldin RPB5 interactor 1.
   
 
 0.979
KP79_PYT11946
RNA polymerase II-associated protein 3.
    
 
 0.973
KP79_PYT08628
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
   
 
 0.966
KP79_PYT06740
PIH1 domain-containing protein 1.
    
 
 0.962
KP79_PYT01373
RuvB-like helicase; Belongs to the RuvB family.
   
 
 0.951
KP79_PYT03597
RNA polymerase II subunit B1 CTD phosphatase rpap2.
    
 
 0.950
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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