Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KP79_PYT10930Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (689 aa)    
Predicted Functional Partners:
KP79_PYT05223
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 0.999
KP79_PYT18070
Microtubule-associated proteins 1A/1B light chain 3B.
   
 0.998
KP79_PYT20085
Autophagy-related protein 3.
    
 0.998
KP79_PYT13575
Gamma-aminobutyric acid receptor-associated protein-like 2.
   
 0.996
KP79_PYT21057
Gamma-aminobutyric acid receptor-associated protein.
   
 0.996
KP79_PYT09863
Microtubule-associated proteins 1A/1B light chain 3C.
   
 0.992
KP79_PYT09130
Ubiquitin-like-conjugating enzyme ATG10.
    
 0.985
KP79_PYT06617
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.984
KP79_PYT06238
WD repeat domain phosphoinositide-interacting protein 2.
    
 0.971
KP79_PYT16334
Serine/threonine-protein kinase unc-51.
   
 
 0.958
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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