Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT13394Iroquois-class homeodomain protein irx-5. (447 aa)    
Predicted Functional Partners:
KP79_PYT04089
Pre-B-cell leukemia transcription factor 2.
    
 0.522
KP79_PYT16179
Homeobox protein ceh-40.
    
 0.522
KP79_PYT14235
Sal-like protein 3.
      
 0.482
KP79_PYT14848
Nuclear receptor subfamily 2 group F member 1-A.
      
 0.473
KP79_PYT20620
Yorkie-like.
    
 0.471
KP79_PYT17294
Hematopoietically-expressed homeobox protein hhex.
    
 
 0.446
KP79_PYT09378
Serum response factor.
   
 
 0.422
KP79_PYT18952
Harmonin.
      
 0.412
KP79_PYT18866
Myelin regulatory factor.
      
 0.400
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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