Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KP79_PYT09657Cytoglobin-2; Belongs to the globin family. (200 aa)    
Predicted Functional Partners:
KP79_PYT13464
Engulfment and cell motility protein 1.
    
   0.576
KP79_PYT11804
Dedicator of cytokinesis protein 3; Belongs to the DOCK family.
   
   0.543
KP79_PYT17024
Dedicator of cytokinesis protein 1; Belongs to the DOCK family.
   
   0.543
KP79_PYT07606
Androglobin; Belongs to the peptidase C2 family.
   
  
 0.514
KP79_PYT01840
Cytochrome b5 reductase 4; Belongs to the cytochrome b5 family.
   
 0.513
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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