Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT14216Protein naked cuticle-like 1. (577 aa)    
Predicted Functional Partners:
KP79_PYT21219
Segment polarity protein dishevelled-like DVL-3.
    
 0.995
KP79_PYT07487
Protein notum-like.
   
  
 0.644
KP79_PYT05254
Axin-2.
   
  
 0.563
KP79_PYT11500
Prickle-like protein 2.
   
  
 0.555
KP79_PYT16021
MORN repeat-containing protein 3.
      
 0.515
KP79_PYT13708
RING finger and SPRY domain-containing protein 1.
      
 0.454
KP79_PYT24421
Catenin beta.
    
 
 0.448
KP79_PYT02041
Pleckstrin homology domain-containing family A member 8.
      
 0.412
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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