Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KP79_PYT14224Ras-related protein Rab-2. (212 aa)    
Predicted Functional Partners:
KP79_PYT20942
Golgin-45.
    
 0.929
KP79_PYT24522
Golgi reassembly-stacking protein 2.
   
 0.895
KP79_PYT24332
Islet cell autoantigen 1.
    
 
 0.873
KP79_PYT01442
Vam6/Vps39-like protein.
    
 
 0.839
KP79_PYT09930
Thyroid receptor-interacting protein 11.
    
 0.808
KP79_PYT00748
ADP-ribosylation factor-like protein 8A; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.795
KP79_PYT13228
Rab proteins geranylgeranyltransferase component A 2.
    
 0.752
KP79_PYT04066
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.747
KP79_PYT17561
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.735
KP79_PYT20513
GRIP and coiled-coil domain-containing protein 2.
    
 0.720
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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