Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT05986Serine/arginine-rich splicing factor 2. (194 aa)    
Predicted Functional Partners:
KP79_PYT16555
Serine/arginine-rich splicing factor 1.
  
 0.997
KP79_PYT18922
Serine/arginine-rich splicing factor 3.
   
 0.997
KP79_PYT08831
Splicing regulatory glutamine/lysine-rich protein 1.
   
 0.988
KP79_PYT09630
Serine/arginine-rich splicing factor 4.
   
 0.987
KP79_PYT22057
Splicing factor U2AF 26 kDa subunit.
   
 0.985
KP79_PYT20205
U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1.
   
 0.979
KP79_PYT16556
Serine/arginine-rich splicing factor 1.
  
 0.978
KP79_PYT06469
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.973
KP79_PYT05712
THO complex subunit 4-A.
  
 0.962
KP79_PYT07808
Serine/arginine repetitive matrix protein 1.
   
 0.950
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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