Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT12065Vacuolar fusion protein MON1-like A. (538 aa)    
Predicted Functional Partners:
KP79_PYT05354
Uncharacterized protein C18orf8.
    
 0.912
KP79_PYT14961
MAU2 chromatid cohesion factor-like.
 
 
    0.881
KP79_PYT15862
Armadillo repeat-containing protein 5.
    
 0.800
KP79_PYT13063
Ras-related protein Rab-9A.
    
 0.800
KP79_PYT01442
Vam6/Vps39-like protein.
   
 
 0.790
KP79_PYT23744
Vacuolar protein sorting-associated protein 11 homolog; Belongs to the VPS11 family.
    
 
 0.780
KP79_PYT24506
Ras-related protein Rab-5C.
    
 
 0.753
KP79_PYT16341
Rab5 GDP/GTP exchange factor.
    
 
 0.723
KP79_PYT11374
MAP kinase-activated protein kinase 2; Belongs to the protein kinase superfamily.
 
      0.719
KP79_PYT08617
Syntaxin-7; Belongs to the syntaxin family.
   
 
 0.685
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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