Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT19490RNA-binding protein 48. (479 aa)    
Predicted Functional Partners:
KP79_PYT08277
Armadillo repeat-containing protein 7.
  
 
 
 0.972
KP79_PYT23811
Gamma-tubulin complex component.
    
 0.770
KP79_PYT02162
Gamma-tubulin complex component.
    
 0.765
KP79_PYT13200
Zinc finger protein 330.
      
 0.740
KP79_PYT23783
U5 small nuclear ribonucleoprotein 40 kDa protein.
    
 
 0.721
KP79_PYT16847
Pre-mRNA-processing-splicing factor 8.
    
   0.716
KP79_PYT07624
Gamma-tubulin complex component.
    
 0.670
KP79_PYT13438
39S ribosomal protein L3, mitochondrial.
   
 
 0.659
KP79_PYT25716
Variant surface antigen F.
    
 0.645
KP79_PYT22909
Gamma-tubulin complex component 6.
    
 0.645
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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