Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT13686TBC1 domain family member 20. (386 aa)    
Predicted Functional Partners:
KP79_PYT10600
Rab3 GTPase-activating protein non-catalytic subunit.
      
 0.809
KP79_PYT06195
Cytosolic Fe-S cluster assembly factor NARFL; Belongs to the NARF family.
   
  
 0.750
KP79_PYT19619
Ras-related protein Rab-18-B.
      
 0.748
KP79_PYT18268
TBC1 domain family member 7.
      
 0.722
KP79_PYT20509
Cell division cycle protein 16-like.
      
 0.717
KP79_PYT22565
TBC1 domain family member 23.
      
 0.709
KP79_PYT10227
Ras-related protein Rab-1A.
    
 0.709
KP79_PYT09669
Ras-related protein ORAB-1.
    
 0.709
KP79_PYT09575
Ras-related protein ORAB-1.
    
 0.709
KP79_PYT09574
Ras-related protein Rab-1A.
    
 0.709
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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