STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT04944Methyl-CpG-binding domain protein 5. (2249 aa)    
Predicted Functional Partners:
KP79_PYT10277
Protein unc-79-like.
    
 0.741
KP79_PYT08039
Polycomb group protein ASXL3.
   
 0.728
KP79_PYT10934
Host cell factor 1.
    
 0.672
KP79_PYT11014
Uncharacterized protein.
    
 0.571
KP79_PYT23328
Lysine-specific histone demethylase 1B.
    
 0.548
KP79_PYT24204
Ly6/PLAUR domain-containing protein 6.
    
 0.476
KP79_PYT24806
Forkhead box protein K2.
    
 0.466
KP79_PYT05225
Forkhead box protein K2.
    
 0.466
KP79_PYT12771
RANBP2-like and GRIP domain-containing protein 8.
    
 0.466
KP79_PYT21519
Uncharacterized protein.
    
 0.464
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.