STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT03293Pre-mRNA-splicing factor CWC25-like. (480 aa)    
Predicted Functional Partners:
KP79_PYT14593
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
    
 0.996
KP79_PYT07083
Coiled-coil domain-containing protein 94.
   
 0.992
KP79_PYT17302
U5 small nuclear ribonucleoprotein helicase.
    
 
 0.987
KP79_PYT24465
Pre-mRNA-splicing factor CWC22-like.
   
 0.984
KP79_PYT14695
SH2 domain-containing adapter protein F.
   
 0.984
KP79_PYT06559
Protein BUD31-like.
    
 
 0.984
KP79_PYT15941
Pre-mRNA-processing factor 19.
    
 
 0.977
KP79_PYT07461
Pre-mRNA-splicing factor syf2.
   
 0.975
KP79_PYT11024
Pre-mRNA-splicing factor ISY1-like.
   
 
 0.951
KP79_PYT24761
WD repeat-containing protein 25.
    
 0.949
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.