Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT08092RING finger protein 11. (143 aa)    
Predicted Functional Partners:
KP79_PYT11974
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.943
KP79_PYT07049
Tumor necrosis factor alpha-induced protein 3.
   
 
 0.881
KP79_PYT05932
E3 ubiquitin-protein ligase.
    
 
 0.876
KP79_PYT04974
Tax1-binding protein 1-like.
   
 
 0.864
KP79_PYT14305
E3 ubiquitin-protein ligase.
    
 
 0.803
KP79_PYT05995
ADP-ribosylation factor-binding protein GGA1.
    
 
 0.720
KP79_PYT09395
Ubiquitin thioesterase OTUB1.
    
 0.695
KP79_PYT06059
STIP1 homology and U box-containing protein 1.
     
 0.627
KP79_PYT10157
Ribosome-releasing factor 2, mitochondrial.
      
 0.622
KP79_PYT19206
E3 ubiquitin-protein ligase HECW2.
    
 
 0.602
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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