STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT23576RING finger protein 32. (420 aa)    
Predicted Functional Partners:
KP79_PYT03955
Ubiquitin-60S ribosomal protein L40.
    
 0.635
KP79_PYT19703
Nucleolar MIF4G domain-containing protein 1.
      
 0.540
KP79_PYT16187
Fmp27_GFWDK domain-containing protein.
    
 
 0.539
KP79_PYT06025
AN1-type zinc finger protein 4.
   
 0.531
KP79_PYT23527
Activator of basal transcription 1.
      
 0.520
KP79_PYT20483
E3 ubiquitin-protein ligase TRIP12.
     
 0.500
KP79_PYT00602
RNA-binding protein 33.
      
 0.468
KP79_PYT00864
Protein LMBR1L; Belongs to the LIMR family.
    
 
 0.460
KP79_PYT12293
Ubiquitin-conjugating enzyme E2-22 kDa; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.430
KP79_PYT09651
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.425
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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