STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT12194Endonuclease V. (308 aa)    
Predicted Functional Partners:
KP79_PYT07352
Coproporphyrinogen-III oxidase.
  
 0.919
KP79_PYT17336
Uroporphyrinogen-III synthase.
  
 
 0.912
KP79_PYT23094
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
  
 0.895
KP79_PYT10063
Porphobilinogen deaminase.
  
 0.845
KP79_PYT18807
DUF3641 domain-containing protein.
  
 
 0.841
KP79_PYT16632
tRNA wybutosine-synthesizing protein 1-like.
    
  0.815
KP79_PYT10633
Molybdenum cofactor biosynthesis protein 1.
    
  0.791
KP79_PYT03862
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
 
 0.651
KP79_PYT09716
Bifunctional glutamate/proline--tRNA ligase.
  
  
 0.649
KP79_PYT08814
Threonylcarbamoyladenosine tRNA methylthiotransferase.
  
 
 0.619
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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