Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT07659Afadin. (2215 aa)    
Predicted Functional Partners:
KP79_PYT23250
Tight junction protein ZO-1; Belongs to the MAGUK family.
   
 
 0.977
KP79_PYT13635
Catenin alpha.
   
 
 0.947
KP79_PYT18587
Vinculin.
   
 
 0.924
KP79_PYT12059
Ras-related protein Rap-1b.
    
 
 0.898
KP79_PYT04325
G-protein-signaling modulator 2.
    
 
 0.859
KP79_PYT11479
Ras-like GTP-binding protein RHO.
    
 
 0.748
KP79_PYT24127
Alpha-catulin.
   
 
 0.725
KP79_PYT21794
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
  
 0.719
KP79_PYT18890
Armadillo repeat protein deleted in velo-cardio-facial syndrome-like.
   
  
 0.714
KP79_PYT19573
Protein AF-10.
      
 0.709
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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