Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
KP79_PYT09213Transmembrane prolyl 4-hydroxylase. (411 aa)    
Predicted Functional Partners:
KP79_PYT06808
5'-nucleotidase domain-containing protein 1.
      
 0.748
KP79_PYT00914
C-mannosyltransferase DPY19L1.
      
 0.640
KP79_PYT11392
Leucine-rich repeat and guanylate kinase domain-containing protein.
   
   0.578
KP79_PYT03448
Uncharacterized protein.
      
 0.568
KP79_PYT16722
Uncharacterized protein.
      
 0.568
KP79_PYT07845
Carboxypeptidase Q.
      
 0.514
KP79_PYT09803
Uncharacterized protein.
    
 
 0.499
KP79_PYT06104
Cytohesin-1.
      
 0.450
KP79_PYT21825
Carbohydrate sulfotransferase 1.
      
 0.402
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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