Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KP79_PYT09214L-threonine 3-dehydrogenase, mitochondrial. (364 aa)    
Predicted Functional Partners:
KP79_PYT18412
2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial.
 
 
 0.983
KP79_PYT08513
L-threonine dehydratase catabolic TdcB.
   
 
 0.949
KP79_PYT16039
L-serine dehydratase/L-threonine deaminase.
   
 
 0.927
KP79_PYT05480
Isovaleryl-CoA dehydrogenase, mitochondrial.
     
 0.836
KP79_PYT09651
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.740
KP79_PYT18139
Tetraspanin.
    
   0.736
KP79_PYT06759
Acetyl-CoA acetyltransferase, cytosolic; Belongs to the thiolase-like superfamily. Thiolase family.
      
 0.623
KP79_PYT17832
Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2.
    
 0.551
KP79_PYT14637
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
  0.522
KP79_PYT12227
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.519
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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