Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KP79_PYT02244 | KP79_PYT06569 | A0A210PW74 | A0A210Q1B9 | Retinoic acid receptor RXR. | Nuclear receptor corepressor 1. | 0.962 |
KP79_PYT02244 | KP79_PYT15512 | A0A210PW74 | A0A210Q2Y7 | Retinoic acid receptor RXR. | AP-5 complex subunit beta-1. | 0.432 |
KP79_PYT02244 | KP79_PYT19244 | A0A210PW74 | A0A210PSH3 | Retinoic acid receptor RXR. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.890 |
KP79_PYT02244 | KP79_PYT23982 | A0A210PW74 | A0A210QCC5 | Retinoic acid receptor RXR. | Nuclear receptor coactivator 2. | 0.989 |
KP79_PYT02244 | KP79_PYT24102 | A0A210PW74 | A0A210PZX1 | Retinoic acid receptor RXR. | Nuclear hormone receptor E75. | 0.634 |
KP79_PYT02244 | KP79_PYT24186 | A0A210PW74 | A0A210PHY2 | Retinoic acid receptor RXR. | Thyroid hormone receptor alpha. | 0.877 |
KP79_PYT03527 | KP79_PYT24186 | A0A210Q7R5 | A0A210PHY2 | Multiple epidermal growth factor-like domains protein 8. | Thyroid hormone receptor alpha. | 0.570 |
KP79_PYT06569 | KP79_PYT02244 | A0A210Q1B9 | A0A210PW74 | Nuclear receptor corepressor 1. | Retinoic acid receptor RXR. | 0.962 |
KP79_PYT06569 | KP79_PYT19244 | A0A210Q1B9 | A0A210PSH3 | Nuclear receptor corepressor 1. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.699 |
KP79_PYT06569 | KP79_PYT23982 | A0A210Q1B9 | A0A210QCC5 | Nuclear receptor corepressor 1. | Nuclear receptor coactivator 2. | 0.745 |
KP79_PYT06569 | KP79_PYT24102 | A0A210Q1B9 | A0A210PZX1 | Nuclear receptor corepressor 1. | Nuclear hormone receptor E75. | 0.919 |
KP79_PYT06569 | KP79_PYT24186 | A0A210Q1B9 | A0A210PHY2 | Nuclear receptor corepressor 1. | Thyroid hormone receptor alpha. | 0.807 |
KP79_PYT13136 | KP79_PYT15468 | A0A210PXX3 | A0A210QBZ8 | Gamma-aminobutyric acid receptor subunit alpha-6; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | Small conductance calcium-activated potassium channel protein. | 0.624 |
KP79_PYT13136 | KP79_PYT24186 | A0A210PXX3 | A0A210PHY2 | Gamma-aminobutyric acid receptor subunit alpha-6; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | Thyroid hormone receptor alpha. | 0.569 |
KP79_PYT15468 | KP79_PYT13136 | A0A210QBZ8 | A0A210PXX3 | Small conductance calcium-activated potassium channel protein. | Gamma-aminobutyric acid receptor subunit alpha-6; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.624 |
KP79_PYT15468 | KP79_PYT24186 | A0A210QBZ8 | A0A210PHY2 | Small conductance calcium-activated potassium channel protein. | Thyroid hormone receptor alpha. | 0.569 |
KP79_PYT15512 | KP79_PYT02244 | A0A210Q2Y7 | A0A210PW74 | AP-5 complex subunit beta-1. | Retinoic acid receptor RXR. | 0.432 |
KP79_PYT15512 | KP79_PYT24102 | A0A210Q2Y7 | A0A210PZX1 | AP-5 complex subunit beta-1. | Nuclear hormone receptor E75. | 0.447 |
KP79_PYT15512 | KP79_PYT24186 | A0A210Q2Y7 | A0A210PHY2 | AP-5 complex subunit beta-1. | Thyroid hormone receptor alpha. | 0.738 |
KP79_PYT19244 | KP79_PYT02244 | A0A210PSH3 | A0A210PW74 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Retinoic acid receptor RXR. | 0.890 |
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