Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT10079Neurexin-1a. (1321 aa)    
Predicted Functional Partners:
KP79_PYT20122
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.907
KP79_PYT24145
MAGUK p55 subfamily member 2; Belongs to the MAGUK family.
    
 0.764
KP79_PYT07738
SH3 and multiple ankyrin repeat domains protein 3.
   
 
 0.644
KP79_PYT09727
Follicle-stimulating hormone receptor.
      
 0.609
KP79_PYT03804
Disks large-associated protein 3.
   
 0.585
KP79_PYT08834
Rho GTPase-activating protein 100F.
   
 
 0.559
KP79_PYT07209
DNA mismatch repair protein Msh2; Component of the post-replicative DNA mismatch repair system (MMR).
      
 0.555
KP79_PYT09101
Band 4.1-like protein 3.
     
 0.525
KP79_PYT14900
Band 4.1-like protein 3.
     
 0.525
KP79_PYT09418
Proteasome activator complex subunit 4.
      
 0.525
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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