STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT18952Harmonin. (548 aa)    
Predicted Functional Partners:
KP79_PYT05508
Usher syndrome type-1G protein-like.
    
 0.959
KP79_PYT06190
Protocadherin Fat 4.
   
 
 0.789
KP79_PYT05236
Unconventional myosin-XV; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.788
KP79_PYT20753
Myosin-VIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.788
KP79_PYT14235
Sal-like protein 3.
      
 0.645
KP79_PYT04261
Whirlin.
      
0.610
KP79_PYT21771
Espin.
   
 0.582
KP79_PYT20122
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.582
KP79_PYT14893
Breast cancer type 2 susceptibility protein-like.
      
 0.569
KP79_PYT07658
Intraflagellar transport protein 88-like.
    
 0.551
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.