Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT18952Harmonin. (548 aa)    
Predicted Functional Partners:
KP79_PYT05508
Usher syndrome type-1G protein-like.
   
 0.985
KP79_PYT06190
Protocadherin Fat 4.
   
 
 0.969
KP79_PYT04261
Whirlin.
     
0.869
KP79_PYT05236
Unconventional myosin-XV; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.832
KP79_PYT20753
Myosin-VIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.832
KP79_PYT14893
Breast cancer type 2 susceptibility protein-like.
      
 0.802
KP79_PYT14235
Sal-like protein 3.
      
 0.797
KP79_PYT13041
Protein diaphanous-like 3.
      
 0.792
KP79_PYT24162
Myosin-IIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.759
KP79_PYT05863
Delphilin.
      
 0.741
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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