Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KP79_PYT03258Serine incorporator 3. (462 aa)    
Predicted Functional Partners:
KP79_PYT19440
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
      
 0.811
KP79_PYT23208
Iporin.
      
 0.802
KP79_PYT06470
Mismatch repair endonuclease PMS2.
 
      0.772
KP79_PYT23277
AP-4 complex subunit epsilon-1.
      
 0.767
KP79_PYT05819
AP-4 complex accessory subunit tepsin.
      
 0.756
KP79_PYT05461
Sn1-specific diacylglycerol lipase beta.
      
 0.719
KP79_PYT18657
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
      
 0.711
KP79_PYT19730
NMDA receptor-regulated protein 2.
      
 0.695
KP79_PYT07629
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
  
 0.655
KP79_PYT15543
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
    
   0.574
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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