Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT26038DNA repair protein complementing XP-G cells-like. (66 aa)    
Predicted Functional Partners:
KP79_PYT19532
TFIIH basal transcription factor complex helicase XPB subunit.
   
 0.863
KP79_PYT09538
Fanconi anemia group M protein.
   
 0.847
KP79_PYT14675
DNA repair protein complementing XP-A cell.
    
 0.847
KP79_PYT21862
DNA repair endonuclease XPF.
   
 0.833
KP79_PYT25189
Fanconi anemia-associated protein of 24 kDa.
    
 0.811
KP79_PYT18630
General transcription factor IIH subunit 1.
    
 0.808
KP79_PYT21427
General transcription factor IIH subunit.
    
 0.802
KP79_PYT05855
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.798
KP79_PYT24829
DNA excision repair protein ERCC-6.
   
 0.784
KP79_PYT05803
DNA excision repair protein ERCC-6.
   
 0.784
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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