Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT17984Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (412 aa)    
Predicted Functional Partners:
KP79_PYT05309
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.995
KP79_PYT23269
Cytoplasmic aconitate hydratase; Belongs to the aconitase/IPM isomerase family.
  
 0.994
KP79_PYT15550
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.991
KP79_PYT05637
2-oxoglutarate dehydrogenase, mitochondrial.
   
 0.989
KP79_PYT10891
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.988
KP79_PYT05766
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.972
KP79_PYT19632
Citrate synthase; Belongs to the citrate synthase family.
  
 0.966
KP79_PYT13465
Aspartate aminotransferase.
   
 0.946
KP79_PYT17545
Aspartate aminotransferase.
   
 0.930
KP79_PYT12772
Malate synthase.
  
  
 0.922
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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