STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT03206Sulfated glycoprotein 1. (1415 aa)    
Predicted Functional Partners:
KP79_PYT05104
Zinc finger protein DPF3.
     
 
0.900
KP79_PYT17507
Chitinase domain-containing protein 1; Belongs to the glycosyl hydrolase 18 family.
     
 0.818
KP79_PYT17644
Galactocerebrosidase.
    
 
 0.801
KP79_PYT11567
Mesencephalic astrocyte-derived neurotrophic factor.
      
 0.647
KP79_PYT18072
Thyroid transcription factor 1-associated protein 26.
     
 0.646
KP79_PYT15655
Glucosylceramidase.
   
 0.643
KP79_PYT05470
Transmembrane protein 130.
   
 0.643
KP79_PYT12927
Glucosylceramidase.
   
 0.643
KP79_PYT20209
Lysosome-associated membrane glycoprotein 1.
   
  
 0.600
KP79_PYT17916
Lysosomal aspartic protease; Belongs to the peptidase A1 family.
   
 0.546
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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