Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT17809Platelet glycoprotein Ib alpha chain. (573 aa)    
Predicted Functional Partners:
KP79_PYT09538
Fanconi anemia group M protein.
   
 0.891
KP79_PYT16587
Centromere protein M.
   
 0.527
KP79_PYT13826
Centromere protein N.
   
 
 0.520
KP79_PYT09200
Centromere protein K.
   
 0.511
KP79_PYT21862
DNA repair endonuclease XPF.
   
 0.483
KP79_PYT09158
Uncharacterized protein.
    
 0.426
KP79_PYT10589
E3 ubiquitin-protein ligase FANCL.
    
 0.419
KP79_PYT07482
Uncharacterized protein.
    
  0.415
KP79_PYT13029
Uncharacterized protein.
    
  0.403
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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