Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT20803Tumor necrosis factor ligand superfamily member 10; Belongs to the tumor necrosis factor family. (346 aa)    
Predicted Functional Partners:
KP79_PYT00087
Death domain-containing adapter protein BG4.
    
 0.985
KP79_PYT19656
Caspase-10; Belongs to the peptidase C14A family.
    
 0.767
KP79_PYT24308
Caspase-8; Belongs to the peptidase C14A family.
    
 0.767
KP79_PYT22139
Caspase-8; Belongs to the peptidase C14A family.
    
 0.767
KP79_PYT20169
Caspase-3; Belongs to the peptidase C14A family.
    
 0.767
KP79_PYT08453
Caspase-3; Belongs to the peptidase C14A family.
    
 0.740
KP79_PYT20805
Cullin-3-A; Belongs to the cullin family.
    
   0.567
KP79_PYT21851
Caspase-2; Belongs to the peptidase C14A family.
    
 0.545
KP79_PYT11110
Interleukin-17 receptor D.
  
   
 0.515
KP79_PYT19618
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
      
 0.455
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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