Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT02636N-acetyltransferase domain-containing protein. (227 aa)    
Predicted Functional Partners:
KP79_PYT09630
Serine/arginine-rich splicing factor 4.
    
 
 0.663
KP79_PYT06469
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.656
KP79_PYT23949
Dual specificity protein kinase CLK2.
   
 
 0.617
KP79_PYT14418
RNA-binding protein 39.
    
 
 0.556
KP79_PYT16555
Serine/arginine-rich splicing factor 1.
    
 
 0.460
KP79_PYT11466
Inner nuclear membrane protein Man1.
    
 
 0.438
KP79_PYT18832
Serine/arginine-rich splicing factor RS2Z32.
    
 
 0.438
KP79_PYT10283
Zinc finger protein 318.
    
 
 0.438
KP79_PYT05946
Splicing factor 1.
   
 
 0.416
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.