STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT0245960S ribosomal protein L18. (186 aa)    
Predicted Functional Partners:
KP79_PYT09651
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
KP79_PYT09347
Elongation factor 1-gamma.
   
  
 0.999
KP79_PYT18432
60S ribosomal protein L32.
  
 0.988
KP79_PYT17868
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.988
KP79_PYT23759
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.988
KP79_PYT19800
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
  
 0.987
KP79_PYT03955
Ubiquitin-60S ribosomal protein L40.
  
 0.987
KP79_PYT04856
60S ribosomal protein L5-A.
  
 0.987
KP79_PYT13932
60S ribosomal protein L14.
  
 0.986
KP79_PYT02398
60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family.
  
 0.985
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.