STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT0237940S ribosomal protein S20. (117 aa)    
Predicted Functional Partners:
KP79_PYT09651
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
KP79_PYT18432
60S ribosomal protein L32.
   
 
 0.999
KP79_PYT18430
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.999
KP79_PYT18404
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 0.999
KP79_PYT05179
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
KP79_PYT17868
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 
 0.999
KP79_PYT02398
60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.999
KP79_PYT02339
40S ribosomal protein S27.
   
 0.999
KP79_PYT02344
Ribosomal protein L37; Binds to the 23S rRNA.
   
 
 0.999
KP79_PYT12701
60S ribosomal protein L9.
  
 
 0.999
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.