STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT02331Proteinase inhibitor. (69 aa)    
Predicted Functional Partners:
KP79_PYT09651
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.689
KP79_PYT02451
60S ribosomal protein L21-A.
   
   0.468
KP79_PYT08800
BRISC and BRCA1-A complex member 1.
    
 0.468
KP79_PYT12251
60S ribosomal protein L21.
   
   0.468
KP79_PYT11010
39S ribosomal protein L2, mitochondrial.
   
 
 0.457
KP79_PYT19205
BRCA1-associated RING domain protein 1.
    
 0.445
KP79_PYT03564
Protein phosphatase 1 regulatory inhibitor subunit 16B.
    
 0.445
KP79_PYT03955
Ubiquitin-60S ribosomal protein L40.
    
  0.431
KP79_PYT18267
60S ribosomal protein L39.
   
   0.426
KP79_PYT02485
60S ribosomal protein L16-A.
   
   0.421
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.