Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
KP79_PYT12396Leucine-rich repeat and fibronectin type-III domain-containing protein 4. (420 aa)    
Predicted Functional Partners:
KP79_PYT09699
Reticulon-like protein.
    
  0.492
KP79_PYT16463
Flotillin-2; Belongs to the band 7/mec-2 family. Flotillin subfamily.
     
 0.479
KP79_PYT01416
Flotillin-1; Belongs to the band 7/mec-2 family. Flotillin subfamily.
     
 0.479
KP79_PYT06383
Glutamate receptor ionotropic, NMDA 2B.
     
 0.442
KP79_PYT06116
Glutamate receptor ionotropic, NMDA 2A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
     
 0.442
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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