Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KP79_PYT12414Glutamate receptor. (966 aa)    
Predicted Functional Partners:
KP79_PYT10411
Protein cornichon-like.
    
 0.724
KP79_PYT05633
PRKCA-binding protein.
    
 0.688
KP79_PYT11326
Glutamate receptor-interacting protein 1.
    
 0.673
KP79_PYT03329
Vesicle-fusing ATPase.
    
  0.637
KP79_PYT06032
Voltage-dependent calcium channel gamma-5 subunit.
    
 0.610
KP79_PYT20122
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.505
KP79_PYT07943
Glutamate [NMDA] receptor subunit 1.
   
 0.504
KP79_PYT05934
Protein transport protein Sec24C.
     
 0.474
KP79_PYT06245
Calcium/calmodulin-dependent protein kinase type II subunit delta; Belongs to the protein kinase superfamily.
    
 0.465
KP79_PYT10391
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
     
  0.456
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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