Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT12708Transmembrane protein 131. (1926 aa)    
Predicted Functional Partners:
KP79_PYT22119
ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family.
    
   0.731
KP79_PYT08689
Uncharacterized protein.
      
 0.682
KP79_PYT09409
Ral GTPase-activating protein subunit beta.
   
  
 0.644
KP79_PYT16661
Tetratricopeptide repeat protein 28.
      
 0.622
KP79_PYT18388
Leucine-rich repeat-containing G-protein coupled receptor 5.
      
 0.596
KP79_PYT18423
Tetratricopeptide repeat protein 17.
      
 0.527
KP79_PYT21803
Tetratricopeptide repeat protein 17.
      
 0.527
KP79_PYT17399
SH3 domain-binding protein 2.
      
 0.515
KP79_PYT07324
Transmembrane protein 39A.
      
 0.473
KP79_PYT09405
N-alpha-acetyltransferase 30.
      
 0.460
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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