Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT13990Neuroguidin. (307 aa)    
Predicted Functional Partners:
KP79_PYT08449
Nucleolar protein 10.
   
 
 0.997
KP79_PYT18405
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.995
KP79_PYT04718
WD repeat-containing protein 46.
   
 0.993
KP79_PYT06820
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.993
KP79_PYT06750
U3 small nucleolar RNA-associated protein 14-like B.
   
 0.992
KP79_PYT00333
U3 small nucleolar RNA-associated protein 18-like.
   
 
 0.992
KP79_PYT18160
Protein AATF.
   
 
 0.990
KP79_PYT11025
U3 small nucleolar ribonucleoprotein IMP4.
   
 
 0.989
KP79_PYT16121
Nucleolar complex protein 4-like B.
   
 0.986
KP79_PYT23670
Bystin.
   
 
 0.985
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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