STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT04747Rab GTPase-activating protein 1. (1029 aa)    
Predicted Functional Partners:
KP79_PYT16341
Rab5 GDP/GTP exchange factor.
   
  0.906
KP79_PYT20147
Ras-related protein Rab-6A.
    
 0.758
KP79_PYT13686
TBC1 domain family member 20.
      
 0.619
KP79_PYT11693
Uncharacterized protein.
    
 0.585
KP79_PYT11771
TBC1 domain family member 22B.
    
 
0.563
KP79_PYT04183
Myc box-dependent-interacting protein 1.
    
 
 0.549
KP79_PYT24355
Protein PTHB1.
      
 0.539
KP79_PYT05995
ADP-ribosylation factor-binding protein GGA1.
    
 0.475
KP79_PYT16844
Rab GTPase-binding effector protein 1.
     
 0.467
KP79_PYT14421
Ras-related protein Rab-22A.
    
 0.439
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.