STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT04701Uncharacterized protein. (289 aa)    
Predicted Functional Partners:
KP79_PYT17302
U5 small nuclear ribonucleoprotein helicase.
    
 
 0.845
KP79_PYT16847
Pre-mRNA-processing-splicing factor 8.
    
 
 0.839
KP79_PYT17288
Pre-mRNA-splicing factor SLU7.
   
 
 0.810
KP79_PYT04844
Mediator of RNA polymerase II transcription subunit 22.
   
  
 0.776
KP79_PYT07461
Pre-mRNA-splicing factor syf2.
   
 
 0.706
KP79_PYT09189
Pre-mRNA-splicing factor 38A.
   
  
 0.705
KP79_PYT24465
Pre-mRNA-splicing factor CWC22-like.
    
 0.700
KP79_PYT11546
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.682
KP79_PYT09681
Protein FAM50-like.
    
 0.679
KP79_PYT09236
Protein FAM32A-like.
   
 
  0.669
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.