Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT10426Lysosomal-trafficking regulator. (3603 aa)    
Predicted Functional Partners:
KP79_PYT13301
Sequestosome-1.
   
 
 0.631
KP79_PYT20209
Lysosome-associated membrane glycoprotein 1.
   
 
 0.590
KP79_PYT21310
Pleckstrin homology domain-containing family G member 5.
    
 0.577
KP79_PYT07857
Nucleolar and coiled-body phosphoprotein 1.
      
 0.521
KP79_PYT17340
WD repeat-containing protein 91.
    
 
 0.518
KP79_PYT10715
RNA-binding protein 34.
      
 0.513
KP79_PYT17782
AT-rich interactive domain-containing protein 5B.
      
 0.513
KP79_PYT18070
Microtubule-associated proteins 1A/1B light chain 3B.
    
 
 0.490
KP79_PYT01642
Guanine nucleotide-binding protein subunit beta-2-like 1.
    
 0.462
KP79_PYT11004
Pleckstrin homology domain-containing family G member 7.
    
 0.457
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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