Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KP79_PYT07881Ubiquitin carboxyl-terminal hydrolase 15. (343 aa)    
Predicted Functional Partners:
KP79_PYT05855
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.628
KP79_PYT08062
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.549
KP79_PYT07321
Tyrosine--tRNA ligase.
      
 0.548
KP79_PYT20483
E3 ubiquitin-protein ligase TRIP12.
    
 
 0.537
KP79_PYT12050
E3 ubiquitin-protein ligase.
   
 0.520
KP79_PYT06821
28S ribosomal protein S9, mitochondrial.
   
 
 0.503
KP79_PYT20615
Replication factor C subunit 4.
    
 0.503
KP79_PYT18709
TNF receptor-associated factor 3.
    
 0.500
KP79_PYT06117
TNF receptor-associated factor 6-B.
    
 0.500
KP79_PYT05430
Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family.
   
 
 0.499
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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