STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT07867Synaptotagmin-like protein 5. (961 aa)    
Predicted Functional Partners:
KP79_PYT23711
Regulating synaptic membrane exocytosis protein 2.
     
0.620
KP79_PYT15823
Uncharacterized protein.
     
 0.620
KP79_PYT23258
Ras-related protein Rab-27A.
    
 
 0.580
KP79_PYT20122
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
     
 0.566
KP79_PYT10140
Protein stoned-B.
   
 0.475
KP79_PYT09157
Ras-related protein Rab-3.
   
 0.449
KP79_PYT22613
Ras-related protein Rab-3A.
   
 0.449
KP79_PYT06651
Intersectin-1.
     
0.446
KP79_PYT21242
Intersectin-1.
     
 0.446
KP79_PYT12487
Intersectin-2.
     
 0.446
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.