STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT06027Eukaryotic initiation factor 4A-III. (203 aa)    
Predicted Functional Partners:
KP79_PYT14782
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.996
KP79_PYT05712
THO complex subunit 4-A.
   
 0.967
KP79_PYT00076
Protein mago nashi-like 2.
   
 0.964
KP79_PYT24426
Protein CASC3.
    
 0.961
KP79_PYT22656
Nuclear RNA export factor 1.
   
 0.959
KP79_PYT24465
Pre-mRNA-splicing factor CWC22-like.
    
 0.955
KP79_PYT06026
Eukaryotic initiation factor 4A-III.
 
     0.951
KP79_PYT20440
Regulator of nonsense transcripts 3A.
   
 0.932
KP79_PYT12771
RANBP2-like and GRIP domain-containing protein 8.
   
 0.929
KP79_PYT11014
Uncharacterized protein.
    
 0.911
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.