Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT05995ADP-ribosylation factor-binding protein GGA1. (711 aa)    
Predicted Functional Partners:
KP79_PYT06886
Cation-independent mannose-6-phosphate receptor.
    
 
 0.950
KP79_PYT16341
Rab5 GDP/GTP exchange factor.
   
 0.949
KP79_PYT16844
Rab GTPase-binding effector protein 1.
    
 0.941
KP79_PYT22012
Sortilin-related receptor.
    
 
 0.913
KP79_PYT11093
Sortilin.
    
 
 0.902
KP79_PYT00946
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.826
KP79_PYT22481
Beta-secretase 1; Belongs to the peptidase A1 family.
    
 0.815
KP79_PYT06025
AN1-type zinc finger protein 4.
    
 0.765
KP79_PYT04666
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 
 0.744
KP79_PYT23269
Cytoplasmic aconitate hydratase; Belongs to the aconitase/IPM isomerase family.
      
 0.741
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.