STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT22737Proteasome subunit beta; Belongs to the peptidase T1B family. (261 aa)    
Predicted Functional Partners:
KP79_PYT21520
Proteasome subunit beta type-6.
   
 0.999
KP79_PYT10198
Proteasome subunit alpha type.
   
 0.999
KP79_PYT14351
Proteasome subunit beta.
   
 0.999
KP79_PYT03932
Proteasome subunit alpha type.
   
 0.999
KP79_PYT02319
Proteasome subunit beta.
   
 0.999
KP79_PYT07627
Proteasome subunit alpha type.
   
 0.999
KP79_PYT10542
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
 0.999
KP79_PYT21179
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.999
KP79_PYT14085
Proteasome subunit alpha type.
   
 0.999
KP79_PYT04565
Proteasome subunit beta.
   
 0.999
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.